genewise output
Score 303.71 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000611_2.0    1 LRKLFVYISAVLMVCAAILRMSMLKLLSFISPGRMRKIHMKMGERTTMT 
                     L+KL+VY+S   M C  I    +L+++ FISP   +K  ++MGE+ TMT 
                     LQKLMVYFSTASMFCYMIGLTVVLRIVHFISPSLSKKRILRMGEKITMT 
OMLM01002656.1-27162 ccacagtttagtatttaagcaggcaagctatcacaaacacaaggaaaaa 
                     taatttatccccttgattgtctttgttattccgtgaagttgtgaatctc 
                     gaaggcttgagcgtccgaactcaggtgtttaacccggcccagtagccgc 


SPP00000611_2.0   50 QNPKFRYEDWGPAFFSLAFIKTLFFVNWCSLGLEAFEGHSAPDSALITL 
                     QNP+F+YEDWGP F S  F+K+     W SLG EAF G  APDS ++T+ 
                     QNPRFKYEDWGPTFESFMFVKSASKHMWLSLGQEAFVGRDAPDSPVVTM 
OMLM01002656.1-27015 cacatatggtgcatgttatgatgtacatctcgcggtggaggcgtcggaa 
                     aacgtaaaaggcctacttttacccaatgtctgaacttggaccaccttct 
                     gtcatgtgtgtggtgccgtcacatgtgggtcaagttgaactacatgccg 


SPP00000611_2.0   99 DRQKTSVHRFLK                          NRPLVLSFGSC 
                     D +KTS+ +++K                          NRPLVLSFGSC 
                     DGKKTSICKYMK          G:G[ggt]        NRPLVLSFGSC 
OMLM01002656.1-26868 ggaaaaatataaGGTGCGTC  Intron 1   CAGGTaaccgtatgat 
                     agaacgtgaata <1-----[26831:26748]-1>  agctttgtggg 
                     cagaacccgcga                          cgggggttatt 


SPP00000611_2.0  123 TXPPFLYKLDEFKQLVKDFSNVADFLIVYLAEAHAT              
                     TXPPF++KL+EFKQLVKDFS+V+DFL+VY+AEAH+T              
                     TXPPFMFKLEEFKQLVKDFSDVSDFLVVYIAEAHST              
OMLM01002656.1-26712 atcctatacggtaccgagtaggtgtcggtagggcta              
                     cgcctttataataattaatgatcattttatcacacc              
                     cacgtgcatggcgaccgccccgtcttgcccagttaa              


SPP00000611_2.0  159                           AWAFKNNVDISVHKNLEERLAAA 
                                                WAF NN DI+ H+ LE+R++AA 
                               D:D[gat]        GWAFTNNYDINQHRTLEDRISAA 
OMLM01002656.1-26604 GGTGAGTG  Intron 2   CAGATgtgtaaatgaacccacggaatgg 
                      <1-----[26603:26211]-1>  ggctcaaaataaagctaagtccc 
                                               cgcttcctcccgcctggcgctaa 


SPP00000611_2.0  183 RTLLKEDPPCPVVVDEMNNITASKYGALPERLYVIQSGKVIYQV      
                     + L+ ++P CPVVVDEMN+ TA KYGALPERLYV+Q+GKV+Y+V      
                     QILVLKEPLCPVVVDEMNDATAIKYGALPERLYVLQAGKVVYKV      
OMLM01002656.1-26139 cacgcagcctcgggggaaggagaatggccgactgccggaggtag      
                     attttaactgctttaataaccctaagctcagtattacgattaat      
                     gcgtaagggcagtgtggttcccagtttgtaagcgggtgatccgg      


//
Making a G in phase 1 intron
Making a D in phase 1 intron
>OMLM01002656.1:subseq(0,69324).pep
LQKLMVYFSTASMFCYMIGLTVVLRIVHFISPSLSKKRILRMGEKITMTQNPRFKYEDWG
PTFESFMFVKSASKHMWLSLGQEAFVGRDAPDSPVVTMDGKKTSICKYMKGNRPLVLSFG
SCTXPPFMFKLEEFKQLVKDFSDVSDFLVVYIAEAHSTDGWAFTNNYDINQHRTLEDRIS
AAQILVLKEPLCPVVVDEMNDATAIKYGALPERLYVLQAGKVVYKV
//
>OMLM01002656.1:subseq(0,69324).[27162:26006].sp
CTGCAAAAACTGATGGTCTATTTTTCGACAGCGTCCATGTTTTGCTACATGATAGGACTC
ACTGTCGTACTGAGGATTGTGCATTTTATTTCACCAAGCCTCAGCAAGAAGCGCATCCTC
AGAATGGGTGAAAAGATCACCATGACCCAGAATCCCAGATTTAAGTATGAGGATTGGGGT
CCGACGTTTGAGTCCTTCATGTTTGTCAAATCCGCATCTAAGCATATGTGGCTGTCTCTC
GGACAAGAGGCTTTTGTGGGAAGAGACGCTCCAGACTCACCTGTGGTCACCATGGACGGA
AAGAAAACAAGCATCTGCAAGTACATGAAAGGTAACAGGCCGCTGGTGTTGAGTTTTGGA
AGTTGTACCTGACCCCCGTTTATGTTCAAACTTGAGGAGTTCAAGCAACTCGTCAAGGAC
TTCAGCGACGTGTCTGACTTTCTTGTGGTCTACATCGCAGAGGCTCATTCAACAGATGGC
TGGGCCTTTACTAACAACTATGACATCAACCAGCACCGCACTCTGGAGGACAGGATCTCT
GCAGCACAGATCCTGGTTCTAAAAGAGCCGCTGTGCCCAGTGGTTGTGGATGAGATGAAT
GATGCCACCGCCATAAAGTATGGTGCTCTGCCTGAAAGACTGTACGTGCTGCAGGCTGGG
AAAGTTGTCTACAAGGTG
//
OMLM01002656.1:subseq(0,69324)	GeneWise	match	27162	26008	303.71	-	.	OMLM01002656.1:subseq(0,69324)-genewise-prediction-1
OMLM01002656.1:subseq(0,69324)	GeneWise	cds	27162	26832	0.00	-	0	OMLM01002656.1:subseq(0,69324)-genewise-prediction-1
OMLM01002656.1:subseq(0,69324)	GeneWise	intron	26831	26748	0.00	-	.	OMLM01002656.1:subseq(0,69324)-genewise-prediction-1
OMLM01002656.1:subseq(0,69324)	GeneWise	cds	26747	26604	0.00	-	2	OMLM01002656.1:subseq(0,69324)-genewise-prediction-1
OMLM01002656.1:subseq(0,69324)	GeneWise	intron	26603	26211	0.00	-	.	OMLM01002656.1:subseq(0,69324)-genewise-prediction-1
OMLM01002656.1:subseq(0,69324)	GeneWise	cds	26210	26008	0.00	-	2	OMLM01002656.1:subseq(0,69324)-genewise-prediction-1
//